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Fox, D, III., Yan, Z., Chen, L., Zhao, Y., et a., Yang, W., & Wang, W. (2014) The histone-fold complex MHF is remodeled by FANCM to recognize branched DNA and protect genome stability. Cell Research, 24, 560-575. [LINK]

Yang, W. (2014) An overview of Y-Family DNA polymerase and a case study of human DNA polymerase eta. Biochemistry 53, 2793-2803. [LINK]

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Grundy, G. J., Gellert, M. & Yang, W. (2010). “Auto-inhibition of DNA cleavage mediated by RAG1 and RAG2 is overcome by an epigenetic signal in V(D)J recombination”. PNAS 107, 22487-92. [LINK]

Yang, W. (2010). “Topoisomerases and site-specific recombinases: similarities in structure and mechanism”. Crit Rev Biochem Mol Biol 45, 520-534. [LINK]

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Yang, W. (2010). “Lessons learnt from UvrD helicase: mechanism for directional movement”. Ann. Rev. Biophys. 39, 367-385. [LINK]

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Wang, F. and Yang, W. (2009). “Structural insight into translesion synthesis by DNA Pol II”.  Cell 139, 1279-1389. [LINK]

Castillo-Acosta VM, Ruiz-Perez, LM, Yang, W, Gonzalez-Pacanowska, D & Vidal AE (2009). “Identification of a residue critical for the excision of 3´-blocking ends in apurinic/apyrimidinic endonucleases of the Xth family”. NAR 37, 1829-42. [LINK]

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Yang, W. (2008). “An equivalent metal ion in one- and two-metal ion catalysis”. Nat. Struct. Mol. Biol. 15, p 1228-31. [LINK]

Nowotny, M., Cerritelli, S. M., Ghirlando, R., Gaidamakov, S. A., Crouch, R. J. and Yang, W. (2008). “Specific recognition of RNA/DNA hybrid and enhancement of human RNase H1 activity by HBD”. EMBO J. 27, 1172-81. [LINK]

Chu, G & Yang, W. (2008). “Here comes the sun: recognition of UV-damaged DNA”. Cell 135, p172-4. [LINK]

Van Duyne G. D. & Yang W. (2008). “Protein-nucleic acid complexes: large, small, old and new”, Curr. Opin. Struct. Biol. 18, 67-69. [LINK]

Ramón-Maiques, S., et al. and Yang, W. (2007). “The PHD finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2”. PNAS 104, 18993-8. [LINK]

Matthews, A. G. W., Kuo, A. J., Ramón-Maiques, R., et al., Yang, W., Gozani, O. and Oettinger, M. A. (2007). “RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination”. Nature 450, 106-10. [LINK]

Nowotny, M., Gaidamakov, S. A., Ghirlando, R., Cerritelli, S. M., Crouch, R. J. and Yang, W. (2007). “Structure of human RNase H1 complexed with an RNA/DNA hybrid: insight into HIV reverse transcription”. Mol. Cell 28, 264-276. [LINK]

Biertumpfel, C., Yang, W. and Suck D. (2007). “Crystal structure of T4 endonuclaese VII resolving a Holliday junction”. Nature 449, 616-620. [LINK]

Yang, W. and Woodgate, R. (2007). “What a difference a decade makes: insights into translesion DNA synthesis”. PNAS 104, 15591-15598. [LINK]

Yang,  W. (2007). “Structure and mechanism for DNA lesion recognition”. Cell Res. 18, 184-97. [LINK]

Yang, W. (2007). “Human MuLa: the jack of all trades in mismatch repair is also an endonuclease”. DNA Repair 6,135-9. [LINK]

Lee, J. Y. and Yang, W. (2006). “UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke”. Cell 127, 1349-1360. [LINK]

Fiala, K. A., Brown, J. A., Ling, H., Kshetry, A. K., Zhang, J., Taylor, J. S., Yang, W., Suo, Z. (2006). “Mechanism of template-independent nucleotide incorporation catalyzed by a template-dependent DNA polymerase”. JMB 365, 590-602. [LINK]

Nowotny, M. and Yang, W. (2006). “Stepwise analyses of metal ions in RNase H catalysis: from substrate destabilization to product release”. EMBO J. 25. 1924-33. [LINK]

Yang, W., Lee, J. Y. and Nowotny, M. (2006). “Making and breaking nucleic acids: two-Mg2+-ion catalysis and substrate specificity”. Mol Cell, 22, 5-13. [LINK]

Yang, W.  (2006). “Poor base stacking at DNA lesions may initiate recognition by many repair proteins”. DNA Repair, ePub ahead of print, March 27, 2006; 5, 654-66, [LINK]

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Vaisman A., Ling, H., Woodgate, R., and Yang, W. (2005). “Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis”.  EMBO J. 24, 2957-2967. [LINK]

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Guarné, A., Brendler T.,  Zhao, Q., Ghirlando, R., Austin, S., and Yang, W. (2005). “Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization”.  EMBO J. 24, 1502-1511. [LINK]

Guarné, A., Ramon-Maiques, S., Wolff, E. M., Ghirlando, R., Hu, X., Miller, J. H., and Yang, W. (2004). “Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair”.  EMBO J. 23, 4134-45. [LINK]

Vidal, A. E., Kannouche, P, Podust, V. N., Yang, W., Lehmann, A. R., and Woodgate, R. (2004).  “PCNA-dependent coordination of the biological functions of human DNA polymerase i”.  JBC 279, 48360-68. [LINK]

Boudsocq, B., Kokoska, R., Plosky, B. S., Vaisman, A, Ling, H., Kunkel, T. A., Yang, W. and Woodgate, R. (2004). “Investigating the role of the little finger domain of Y-family DNA polymerase in low-fidelity synthesis and translesion replication”, JBC 279, 32932-32940. [LINK]

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Ling, H, Boudsocq, F., Woodgate, R. and Yang, W. (2004). “Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift”, Mol Cell 13, 751-762. [LINK]

Ling, H, Sayer, J.M., Plosky, B.S., Yagi, H., Boudsocq, F., Woodgate, R., Jerina, D. M. and Yang, W. (2004). “Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase”. PNAS 101, 2265-2269. [LINK]

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Modesti, M., Junop, M. S., Ghirlando, R., van de Rakt, M., Gellert, M., Yang, W. and Kanaar R. (2003). “Tetrameerization and DNA ligase IV interaction of XRCC4 are mutually exclusive”.  JMB 334, 215-228. [LINK]

Ling, H, Boudsocq, F., Plosky, B., Woodgate, R. and Yang, W. (2003). “Replication of a cis-syn thymine dimer at atomic resolution”. Nature 424, 1083-1087 (Internet advanced publication on Aug. 6, 2003). [LINK]

Hu, X., Machius, M., and Yang. W. (2003). “Monovalent cation dependence and pre- ference of GHKL ATPases and kinases”.  FEBS Lett.  544, 268-273. [LINK]

Yang, W., Rogozin, I.B., and Koonin, E.V. (2003). “Yeast POL5 is an evolutionarily conserved regulator of rDNA transcription unrelated to any known DNA polymerases” Cell Cycle 2, 120-122. [LINK]

Alani, E., Lee, J. Y., Schofield, M. J., Kijas, A. W., Hsieh, P., and Yang, W. (2003). “Crystal structure and biochemical analysis of the MutS-ADP·BeF3- complex suggests a conserved mechanism for ATP interactions in mismatch repair” JBC 278, pp 16088-16094. [LINK]

Junop, M. S., Yang, W., Funchain, P., Clendenin, W. and Jeffrey H. Miller (2003). “In vitro and in vivo studies of MutS, MutL and MutH mutants: correlation of mismatch repair and DNA recombination” DNA Repair 2, 387-405. [LINK]

Yang, W. (2003). “DNA damage repair polymerase Y”.  Curr. Opin. Struct. Biol. 13, 23-30. [LINK]

Drotschmann, K., Yang, W. and Kunkel, T. A.  (2002).  “Evidence for ssequential action of two ATPase active sites in yeast Msh2-Msh6” DNA Repair 1, 743-753. [LINK]

Guarné, A., Zhao, Q.-H. Ghirlando, R.. and Yang, W. (2002).  “SeqA complexed with hemimethylated DNA: negative modulation of E. coli replication initiation” Nat. Struct. Biol. 9, 839-843. [LINK]

Boudsocq, F., Ling, H., Yang, W. and Woodgate R. (2002). “Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass”. DNA Repair 1, 343-358. [LINK]

Jones, J. M., Gellert, M. and Yang, W. (2001). “A Ku bridge over broken DNA.” Structure 9, 881-884. [LINK]

Drotschmann, K., Yang, W., Brownewell, F. E., Kool, E. T. and Kunkel, T. A. (2001). “Asymmetric recognition of DNA local distortion: structure-based functional studies of Eukaryotic Msh2-Msh6”. JBC 276, 46225-46229. [LINK]

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